MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Mammaliicoccus lentus
19428wG1_AE2
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 72
bases: 2,860,887 bps
CDS: 2,807
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,876
Total number of protein coding genes annotated/found:
2,807
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Items 21 - 40
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5021|JADGMD010000010.1
SEQF5021_00022
Genome Viewer
NA
AA
225/75
21227-21451
Putative sulfur carrier protein YeeD
SEQF5021|JADGMD010000010.1
SEQF5021_00023
Genome Viewer
NA
AA
948/316
21623-22570
Catabolite control protein A
SEQF5021|JADGMD010000010.1
SEQF5021_00024
Genome Viewer
NA
AA
1482/494
22644-24125
Sucrose-6-phosphate hydrolase
SEQF5021|JADGMD010000010.1
SEQF5021_00025
Genome Viewer
NA
AA
1155/385
24312-25466
hypothetical protein
SEQF5021|JADGMD010000010.1
SEQF5021_00026
Genome Viewer
NA
AA
1701/567
27229-25529
hypothetical protein
SEQF5021|JADGMD010000010.1
SEQF5021_00027
Genome Viewer
NA
AA
768/256
28150-27383
Membrane-embedded CAAX protease MroQ
SEQF5021|JADGMD010000010.1
SEQF5021_00028
Genome Viewer
NA
AA
288/96
28327-28614
10 kDa chaperonin
SEQF5021|JADGMD010000010.1
SEQF5021_00029
Genome Viewer
NA
AA
1626/542
28668-30293
60 kDa chaperonin
SEQF5021|JADGMD010000010.1
SEQF5021_00030
Genome Viewer
NA
AA
564/188
30387-30950
hypothetical protein
SEQF5021|JADGMD010000010.1
SEQF5021_00031
Genome Viewer
NA
AA
513/171
31567-31055
Methylated-DNA--protein-cysteine methyltransferase
SEQF5021|JADGMD010000010.1
SEQF5021_00032
Genome Viewer
NA
AA
813/271
31686-32498
D-methionine-binding lipoprotein MetQ
SEQF5021|JADGMD010000010.1
SEQF5021_00033
Genome Viewer
NA
AA
1050/350
32694-33743
Small ribosomal subunit biogenesis GTPase RsgA
SEQF5021|JADGMD010000010.1
SEQF5021_00034
Genome Viewer
NA
AA
177/59
34270-34094
hypothetical protein
SEQF5021|JADGMD010000010.1
SEQF5021_00035
Genome Viewer
NA
AA
1284/428
34438-35721
LL-diaminopimelate aminotransferase
SEQF5021|JADGMD010000010.1
SEQF5021_00036
Genome Viewer
NA
AA
378/126
35890-36267
HTH-type transcriptional repressor YtrA
SEQF5021|JADGMD010000010.1
SEQF5021_00037
Genome Viewer
NA
AA
876/292
36269-37144
Multidrug efflux system ATP-binding protein
SEQF5021|JADGMD010000010.1
SEQF5021_00038
Genome Viewer
NA
AA
657/219
37145-37801
hypothetical protein
SEQF5021|JADGMD010000010.1
SEQF5021_00039
Genome Viewer
NA
AA
666/222
37798-38463
hypothetical protein
SEQF5021|JADGMD010000010.1
SEQF5021_00040
Genome Viewer
NA
AA
870/290
38479-39348
Vitamin B12 import ATP-binding protein BtuD
SEQF5021|JADGMD010000010.1
SEQF5021_00041
Genome Viewer
NA
AA
729/243
39348-40076
hypothetical protein
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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